Tumour evolution and microenvironment interactions in 2D and 3D space Temporal recording of mammalian development and precancer Progressive plasticity during colorectal cancer metastasis A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features Differential chromatin accessibility and transcriptional dynamics define breast cancer subtypes and their lineages Defining the transcriptional lineages of breast cancer subtypes Global loss of promoter-enhancer connectivity and rebalancing of gene expression during early colorectal cancer carcinogenesis A 3D genome view of colon cancer initiation Multiomic analysis of familial adenomatous polyposis reveals molecular pathways associated with early tumorigenesis
Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics Quality control for single-cell analysis of high-plex tissue profiles using CyLinter MIM-CyCIF: masked imaging modeling for enhancing cyclic immunofluorescence (CyCIF) with panel reduction and imputation Consensus tissue domain detection in spatial omics data using multiplex image labeling with regional morphology (MILWRM)
