写在前面
具体内容
构建首个驯化葡萄图形泛参考基因组（Grapepan v1.0）
图1 |葡萄T2T基因组组装及泛参考基因组的构建
数量遗传学解析葡萄复杂农艺性状的遗传基础
图2 | 葡萄不同群体间29个农艺性状及其相关性
图3 | 与农艺性状相关的候选基因座及其人工选择印记
图4 | 连锁不平衡衰减和丢失的遗传力
基于机器学习的葡萄全基因组选择育种体系
图5 | 基因组选择育种策略
图6 | 主要农艺性状的预测准确率
图7 | 葡萄基因型选择育种与杂交育种的比较
图8 | 葡萄全基因组选择育种的优势
原文链接：https://www.nature.com/articles/s41588-024-01967-5
参考文献：
【1】 Zhou, Yongfeng, et al. "Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication." Proceedings of the National Academy of Sciences 114.44 (2017): 11715-11720. 【2】 Xiao, Hua, et al. "Adaptive and maladaptive introgression in grapevine domestication." Proceedings of the National Academy of Sciences 120.24 (2023): e2222041120. 【3】 Zhou, Yongfeng, et al. "The population genetics of structural variants in grapevine domestication." Nature plants 5.9 (2019): 965-979. 【4】 Wang, Xu, et al. "Integrative genomics reveals the polygenic basis of seedlessness in grapevine." Current Biology 34.16 (2024): 3763-3777. 【5】 Gaut, Brandon S., et al. "Demography and its effects on genomic variation in crop domestication." Nature plants 4.8 (2018): 512-520. 【6】 Zhang, Tianhao, et al. "Population genomics highlights structural variations in local adaptation to saline coastal environments in woolly grape." Journal of Integrative Plant Biology (2024). 【7】 Peng, Yanling, et al. "The genomic and epigenomic dynamics of hemizygous genes across crops with contrasting mating systems." bioRxiv (2024): 2024-05. 【8】 Shi, Xiaoya, et al. "The complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding." Horticulture Research 10.5 (2023): uhad061. 【9】 Long, Qiming, et al. "Population comparative genomics discovers gene gain and loss during grapevine domestication." Plant Physiology 195.2 (2024): 1401-1413. 【10】 Gan, Yu, et al. "Deep learning based genomic breeding of pest-resistant grapevine." bioRxiv (2024): 2024-03. |
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